Aqualogreadr: Difference between revisions

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imported>Scott
(Created page with " ===Purpose=== Reads JYHoriba Floromax ASCII files in as a DataSet Object. ===Synopsis=== :code here ===Description=== Description of the function and optionally include ot...")
 
imported>Benjamin
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===Purpose===
===Purpose===


Reads JYHoriba Floromax ASCII files in as a DataSet Object.
Reads Horiba JY Aqualog files with Raleigh removal.


===Synopsis===
===Synopsis===


:code here
:out = aqualogreadr(file,options);
 
===Description===
 
Description of the function and optionally include other things.


====Inputs====
====Inputs====
* '''first''' = first input is this.
* '''file''' = One of the following identifications of files to read:
 
:* A single string identifying the file to read
====Optional Inputs====
:: ('example')
* '''second''' = optional second input is this.
:* A cell array of strings giving multiple files to read
:: ({'example_a' 'example_b' 'example_c'})
:* An empty array indicating that the user should be prompted to locate the file(s) to read
:: ([])


====Outputs====
====Outputs====
* '''firstout''' = first output is this.
* '''out''' = A DataSet object with date, time, info (data from cell (1,1)), variable names (vars), sample names (samps), and data matrix (data).  


===Options===
===Options===
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options =  a structure array with the following fields:
options =  a structure array with the following fields:


* '''plots''': [ {'none'} | 'final' ] governs plotting of results, and
* '''waitbar''' : [ 'off' |{'on'}] Governs use of waitbars to show progress.
* '''order''': positive integer for polynomial order {default = 1}.
* '''scattercorrection''' : [ {'off'} | 'on'] calls [[flucut]] for Rayleigh correction.
 
* '''flucut''' : [[flucut|FLUCUT]] options field for governing calls to [[flucut|FLUCUT]].
===Example===
** '''LowZero''' : Option (LowZero) for [[flucut|FLUCUT]].
 
** '''TopZero''' : Option (TopZero) for [[flucut|FLUCUT]].
<pre>
* '''LowMiss''' : Input (LowMiss) to [[flucut|FLUCUT]].
>>This is an example
* '''TopMiss''' : Input (FopMiss) to [[flucut|FLUCUT]].
Error: does not exist
* '''textreadr''' : TEXTREADR options field for governing calls to [[textreadr|TEXTREADR]].
</pre>
* '''nonmatching''' : [{'error'}| 'cell' ] Governs handling non-matching data from multiple files.


===See Also===
===See Also===


[[baselinew]], [[deresolv]]
[[Data Importing Formats]], [[hjyreadr]], [[jascoeemreadr]], [[jcampreadr]],
[[spcreadr]], [[writespc]], [[xclreadr]]

Latest revision as of 11:38, 24 July 2017

Purpose

Reads Horiba JY Aqualog files with Raleigh removal.

Synopsis

out = aqualogreadr(file,options);

Inputs

  • file = One of the following identifications of files to read:
  • A single string identifying the file to read
('example')
  • A cell array of strings giving multiple files to read
({'example_a' 'example_b' 'example_c'})
  • An empty array indicating that the user should be prompted to locate the file(s) to read
([])

Outputs

  • out = A DataSet object with date, time, info (data from cell (1,1)), variable names (vars), sample names (samps), and data matrix (data).

Options

options = a structure array with the following fields:

  • waitbar : [ 'off' |{'on'}] Governs use of waitbars to show progress.
  • scattercorrection : [ {'off'} | 'on'] calls flucut for Rayleigh correction.
  • flucut : FLUCUT options field for governing calls to FLUCUT.
    • LowZero : Option (LowZero) for FLUCUT.
    • TopZero : Option (TopZero) for FLUCUT.
  • LowMiss : Input (LowMiss) to FLUCUT.
  • TopMiss : Input (FopMiss) to FLUCUT.
  • textreadr : TEXTREADR options field for governing calls to TEXTREADR.
  • nonmatching : [{'error'}| 'cell' ] Governs handling non-matching data from multiple files.

See Also

Data Importing Formats, hjyreadr, jascoeemreadr, jcampreadr, spcreadr, writespc, xclreadr